The detailed information of tRNA gene sequence


Sequence ID>SRA1044253
Genome IDSRR035092.248652
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 266
End posion on genome 193
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatatattg
tRNA gene sequence 
GCAACCTTAGCGACAATTGGCAGTGCCGCAAACTCATAATTTGTAAAGTAGTGGTTCGAG
TCCACTAGGTTGCAtta
Downstream region at tRNA end position 
tttattttaa
Secondary structure (Cloverleaf model)
>SRA1044253	Met	CAT
                   g      Atta tttattttaa
                     G - C
                     C - G
                     A - T
                     A - T
                     C - G
                     C - G
                     T - A          T G
                    T     T C A C C     A
      A A C        A      | | | | |     G
    T       A G C G       A G T G G     C
    T         + | |                 T T
    G       G T G C
      G C A        C     AAAGT
                    G + T
                    C - G
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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