The detailed information of tRNA gene sequence


Sequence ID>SRA1044259
Genome IDSRR035092.249480
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 167
End posion on genome 243
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagagtatg
tRNA gene sequence 
GGCAATTGTGGGGAACTGGTTATCCCGCTAGTCTCATAAGCTAGAGAAAGAAGGTTCGAT
TCCTTCCATTGCCACAA
Downstream region at tRNA end position 
gttattatga
Secondary structure (Cloverleaf model)
>SRA1044259	Met	CAT
                   g      ACAA gttattatga
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A
                     T   C          T T
                    G     C T T C C     A
      C A A        T      | | | | |     G
    T       G G G G       G A A G G     C
    G       + | | |                 T T
    G       T C C C
      T T A        G     AGAAA
                    C - G
                    T - A
                    A - T
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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