The detailed information of tRNA gene sequence


Sequence ID>SRA1044287
Genome IDSRR035092.253042
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 395
End posion on genome 306
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgcaaacgc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGGTAGTCTTGAAAACTATTAGGCCTGCAAGGGTC
TCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
ctttatcgtg
Secondary structure (Cloverleaf model)
>SRA1044287	Ser	TGA
                   c      GCCA ctttatcgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TAGGCCTGCAAGGGTCTC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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