The detailed information of tRNA gene sequence


Sequence ID>SRA1044320
Genome IDSRR035092.259144
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 58
End posion on genome 148
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccattttcgg
tRNA gene sequence 
GGAAGCTTCGCATAATGGTAGTGCGTCTGGTTTGAACCCAGATGAAGCGATGTAAGTCGC
TGTAGGTGTTCGATTCACCTAGCTTCCCCCA
Downstream region at tRNA end position 
tacataaggc
Secondary structure (Cloverleaf model)
>SRA1044320	Ser	TGA
                   g      CCCA tacataaggc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T T
                    T     T C C A C     A
        A A        C      | | | | |     G
      T     T A C G       A G G T G     C
      G     + | | |                 T T
      G     G T G C
        T A        G     TGAAGCGATGTAAGTCGCTGT
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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