The detailed information of tRNA gene sequence


Sequence ID>SRA1044377
Genome IDSRR035092.270513
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 132
End posion on genome 205
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tctcttagta
tRNA gene sequence 
GGGTGATTAGTTAAATGGTATAACAGTGGTCTCCAAAACCACGGTCAGGGGTTCAATTCC
TCTATCACCCGCCT
Downstream region at tRNA end position 
ttaaaattgt
Secondary structure (Cloverleaf model)
>SRA1044377	Trp	CCA
                   a      GCCT ttaaaattgt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T T
                    T     T C T C C     A
        A A        A      | | + | |     A
      T     A T T G       A G G G G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     GGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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