The detailed information of tRNA gene sequence


Sequence ID>SRA1044416
Genome IDSRR035092.276281
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 234
End posion on genome 158
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagtttactt
tRNA gene sequence 
GGGCGTGTAGCTCAGTCGGTTAGAGCGCATCCCTGATAAGGATGAGGTCCCTAGTTCGAT
TCTAGGTACGCCCACCT
Downstream region at tRNA end position 
aagttttttt
Secondary structure (Cloverleaf model)
>SRA1044416	Ile	GAT
                   t      ACCT aagttttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G + T          T T
                    T     G G A T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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