The detailed information of tRNA gene sequence


Sequence ID>SRA1044434
Genome IDSRR035092.279453
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 436
End posion on genome 355
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGAATGATAGCATAACGGTAATGCATCGCTTTGCTAAGGCGACGGCGTAAAAGCCTTGTA
GGTTCGAGTCCTGCTCATTCCGtag
Downstream region at tRNA end position 
gagacgtggc
Secondary structure (Cloverleaf model)
>SRA1044434	Ser	GCT
                   a      Gtag gagacgtggc
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     A - T          T G
                    T     C G T C C     A
        A A        A      | + | | |     G
      C     T A C G       G T A G G     C
      G     | | | |                 T T
      G     A T G C
        T A        A     CGGCGTAAAAGCCTT
                    T - A
                    C - G
                    G - C
                    C - G
                    T + G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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