The detailed information of tRNA gene sequence


Sequence ID>SRA1044435
Genome IDSRR035092.279453
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 352
End posion on genome 261
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcattccgta
tRNA gene sequence 
GGAGACGTGGCAGAGTCTGGTTTATCGCAACGGTCTTGAAAATCGTCGGGCTGTAAAACG
CTCCGTGGGTTCGAATCCTACCGTCTCCGCCA
Downstream region at tRNA end position 
aaattacgaa
Secondary structure (Cloverleaf model)
>SRA1044435	Ser	TGA
                   a      GCCA aaattacgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A T C C     A
    C T G A        G      | | + | |     G
  T         G A C G       G T G G G     C
  G         +   | |                 T T
  G         T C G C
    T T T A        A     CGGGCTGTAAAACGCTCC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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