The detailed information of tRNA gene sequence


Sequence ID>SRA1044442
Genome IDSRR035092.280621
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 232
End posion on genome 159
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttctgccaa
tRNA gene sequence 
GCCAGTATGGTGTAGTGGAAACATAGTGGTCTCCAAAACCATAGCCTGAGGTTCGATTCC
TTGTGCTGGTGCCA
Downstream region at tRNA end position 
aacaatttaa
Secondary structure (Cloverleaf model)
>SRA1044442	Trp	CCA
                   a      GCCA aacaatttaa
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     T + G
                     A - T          T T
                    T     G T T C C     A
        G A        G      + + | | |     G
      T     T G T G       T G A G G     C
      G     | | | +                 T T
      G     A C A T
        A A        A     AGCC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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