The detailed information of tRNA gene sequence


Sequence ID>SRA1044539
Genome IDSRR035092.295821
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 403
End posion on genome 330
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttgagaattt
tRNA gene sequence 
GCCTCAGTAGCTCAGTTGGTAGAGTGTTACCTTGGTAAGGTAGAGGTCCTGGGTTCAAAC
CCCAGCTGAGGCTCtt
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>SRA1044539	Thr	GGT
                   t      TCtt tttttatttt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          C A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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