The detailed information of tRNA gene sequence


Sequence ID>SRA1044543
Genome IDSRR035092.296562
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 165
End posion on genome 239
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataaacagct
tRNA gene sequence 
GGGGGTGTAGTGAAATGGCTATCATTCAAATCTCCAAAATTTGCGTTCTAGGTTCGAATC
CTAGCACCCCCGCCA
Downstream region at tRNA end position 
aaattatggg
Secondary structure (Cloverleaf model)
>SRA1044543	Trp	CCA
                   t      GCCA aaattatggg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G A T C C     A
      T A A        A      | | | | |     G
    G       A G T G       C T A G G     C
    G       | | | +                 T T
    C       T C A T
      T A          T     CGTT
                    C - G
                    A - T
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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