The detailed information of tRNA gene sequence


Sequence ID>SRA1044548
Genome IDSRR035092.298409
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 486
End posion on genome 573
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tctaacttaa
tRNA gene sequence 
GGAGGGGTGCCTGAGTGGTTGAAAGGGATGGCTTCGAAAGTCATTATAGTTGTAAGACTA
TCGTGAGTTCAAATCTCACCCCCTCCGCtt
Downstream region at tRNA end position 
tcttaacaaa
Secondary structure (Cloverleaf model)
>SRA1044548	Ser	CGA
                   a      GCtt tcttaacaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    G       G T C C       G T G A G     C
    G         | | |                 T T
    T       A A G G
      T G A        G     TATAGTTGTAAGACTATC
                    A - T
                    T - A
                    G - C
                    G + T
                    C - G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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