The detailed information of tRNA gene sequence


Sequence ID>SRA1044580
Genome IDSRR035092.305045
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 445
End posion on genome 372
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
atttagacgg
tRNA gene sequence 
GGGCCTGTAGCTCACCTGGTAGAGCGCGTGGTTCGCAATCACGAGGCAAGGAGTTCGAGT
CTCCTCAGGTCCACat
Downstream region at tRNA end position 
atgatataca
Secondary structure (Cloverleaf model)
>SRA1044580	Ala	CGC
                   g      ACat atgatataca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T C C T C     A
      C C A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCA
                    C - G
                    G - C
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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