The detailed information of tRNA gene sequence


Sequence ID>W2011392436
Genome IDRCCJ01000001
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenivirga caldilitoris DSM 16510 [RCCJ]
Start position on genome 303894
End posion on genome 303971
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tttataggct
tRNA gene sequence 
GCCCCCATCGTCTAGCCTGGCCTAGGACGCCGGCCTTTCACGCCGGAAACGCGGGTTCAA
ATCCCGCTGGGGGTGCCA
Downstream region at tRNA end position 
ttcactttca
Secondary structure (Cloverleaf model)
>W2011392436	Glu	TTC
                   t      GCCA ttcactttca
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       G C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        G     AAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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