The detailed information of tRNA gene sequence


Sequence ID>W2011392437
Genome IDRCCJ01000001
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenivirga caldilitoris DSM 16510 [RCCJ]
Start position on genome 483911
End posion on genome 483983
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttaatattga
tRNA gene sequence 
CGGGGTGTAGCGCAGGTGGCAGCGCGCTGGCATGGGGGGCCAGAGGTCCCGGGTTCAAGT
CCCGGCACCCCGAttt
Downstream region at tRNA end position 
ggaaaataaa
Secondary structure (Cloverleaf model)
>W2011392437	Pro	GGG
                   a      Attt ggaaaataaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G G C C C     A
      G G A        A      | | | | |     A
    T       C G C G       C C G G G     C
    G       | | | |                 T T
    G       G C G C
      C A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  A       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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