The detailed information of tRNA gene sequence


Sequence ID>W2011392448
Genome IDRCCJ01000001
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenivirga caldilitoris DSM 16510 [RCCJ]
Start position on genome 1722262
End posion on genome 1722335
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttgcaaggca
tRNA gene sequence 
GGGCCTCTAGCTCAGTCGGTTAGAGCGTGCCCCTGATAAGGGCAAGGTCCCAGGTTCGAA
TCCTGGGAGGCCCAtat
Downstream region at tRNA end position 
tgggggcatc
Secondary structure (Cloverleaf model)
>W2011392448	Ile	GAT
                   a      Atat tgggggcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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