The detailed information of tRNA gene sequence


Sequence ID>W2011392466
Genome IDRCCJ01000001
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenivirga caldilitoris DSM 16510 [RCCJ]
Start position on genome 857196
End posion on genome 857106
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaaagact
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGACTAAGGCGGGGGATTTGAAATCCCTTGAGGGTTCGCAGCCC
TCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gatagaagta
Secondary structure (Cloverleaf model)
>W2011392466	Ser	TGA
                   t      GCCA gatagaagta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C T A        G     TGAGGGTTCGCAGCCCTCC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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