The detailed information of tRNA gene sequence


Sequence ID>SRA1044617
Genome IDSRR035092.310263
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 400
End posion on genome 328
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aagagttcat
tRNA gene sequence 
GCGCGGGTGGCACAGTGGTTACTGCACTCGGTTGCAGCCCGGGTATTCATGGGTTCGAAT
CCCATCCCGCGCTtta
Downstream region at tRNA end position 
cggcctctga
Secondary structure (Cloverleaf model)
>SRA1044617	Cys	GCA
                   t      Ttta cggcctctga
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       C A C G       A T G G G     C
    G         | | |                 T T
    T       C T G C
      T A          A     TATTC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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