The detailed information of tRNA gene sequence


Sequence ID>W2011396389
Genome IDRCFQ01000001
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. EBB-1 [RCFQ]
Start position on genome 179475
End posion on genome 179399
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aacccttttc
tRNA gene sequence 
GCCTTCGTAGCTCAGCTGGATAGAGCGACCCCCTCCTAAGGGGTAGGCCACAGGTTCGAC
TCCTGTCGAGGGCACCA
Downstream region at tRNA end position 
ttttagatac
Secondary structure (Cloverleaf model)
>W2011396389	Arg	CCT
                   c      ACCA ttttagatac
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          T C
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    A - T
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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