The detailed information of tRNA gene sequence


Sequence ID>W2011396407
Genome IDRCFQ01000010
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. EBB-1 [RCFQ]
Start position on genome 54140
End posion on genome 54057
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ttttttatat
tRNA gene sequence 
GCGAGGGTGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTATCCATGATGTGGGG
GTTCGAGTCCCCCCCCTCGTACCA
Downstream region at tRNA end position 
tacatatgga
Secondary structure (Cloverleaf model)
>W2011396407	Leu	TAG
                   t      ACCA tacatatgga
                     G + T
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCCATGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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