The detailed information of tRNA gene sequence


Sequence ID>W2011396414
Genome IDRCFQ01000015
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. EBB-1 [RCFQ]
Start position on genome 57087
End posion on genome 57173
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gacactatag
tRNA gene sequence 
GCCGAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGCTAGTTTCCTCTTGGAAGTG
CTGGTTCGAGTCCAGTTCTCGGTACCA
Downstream region at tRNA end position 
tttagtaata
Secondary structure (Cloverleaf model)
>W2011396414	Leu	CAG
                   g      ACCA tttagtaata
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     T G A C C     A
      T A A        G      + | | | |     G
    T       G G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTTCCTCTTGGAAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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