The detailed information of tRNA gene sequence


Sequence ID>W2011396417
Genome IDRCFQ01000023
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. EBB-1 [RCFQ]
Start position on genome 5217
End posion on genome 5141
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacaacgaaa
tRNA gene sequence 
GGCGCTTTAGCTCAGCTGGTTAGAGCACCGGAATCATAATCCGGGTGTCCGGGGTTCGAG
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position 
tctaagttgt
Secondary structure (Cloverleaf model)
>W2011396417	Met	CAT
                   a      ACCA tctaagttgt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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