The detailed information of tRNA gene sequence


Sequence ID>W2011396418
Genome IDRCFQ01000030
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. EBB-1 [RCFQ]
Start position on genome 5246
End posion on genome 5172
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcgcaattac
tRNA gene sequence 
GCTCCCATCGTCTAGCGGTTAGGACGCTGCCCTCTCACGGCGGAAACAGGGGTTCGATTC
CCCTTGGGAGTACCA
Downstream region at tRNA end position 
tttgacccca
Secondary structure (Cloverleaf model)
>W2011396418	Glu	CTC
                   c      ACCA tttgacccca
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    T + G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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