The detailed information of tRNA gene sequence


Sequence ID>SRA1044649
Genome IDSRR035092.316584
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 4
End posion on genome 80
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
nnnnnnntaa
tRNA gene sequence 
GGGCCGTTAGCTCAGTCGGCTAGAGCACTACATTCGCATTGTAGAGGTCGGGGGTTCGAT
TCCCCCACGGTCCACCA
Downstream region at tRNA end position 
gaaattgtcc
Secondary structure (Cloverleaf model)
>SRA1044649	Ala	CGC
                   a      ACCA gaaattgtcc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C C C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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