The detailed information of tRNA gene sequence


Sequence ID>W2011402046
Genome IDRCOH01000106
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus necator H850 [RCOH]
Start position on genome 1820
End posion on genome 1907
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cgtcgctaca
tRNA gene sequence 
GGGCCGGACGCCGTGTTGGTTGCAGGCAGCGGACTCATAATCCGCCGGAGACATCCCACC
GTGGGTTCGAATCCCACCCGGCCCACCA
Downstream region at tRNA end position 
ggcgcgatgt
Secondary structure (Cloverleaf model)
>W2011402046	Ile2	CAT
                   a      ACCA ggcgcgatgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    A     C A C C C     A
    T T G T        C      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    T G C          A     CGGAGACATCCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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