The detailed information of tRNA gene sequence


Sequence ID>SRA1044686
Genome IDSRR035092.322650
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 187
End posion on genome 261
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctccaataa
tRNA gene sequence 
GGCGTGTTGTCAGAGTGGTTTATGTTGCGGTCTGCAAAATCGCATACGCCGGTTCGATCC
CGGCACACGCCTCCA
Downstream region at tRNA end position 
aggtataata
Secondary structure (Cloverleaf model)
>SRA1044686	Cys	GCA
                   a      TCCA aggtataata
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     T - A          C T
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       G A C T       G C C G G     C
    G         | |                   T T
    T       A T G T
      T T          T     ATAC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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