The detailed information of tRNA gene sequence


Sequence ID>SRA1044716
Genome IDSRR035092.327426
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 277
End posion on genome 201
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taagtcatag
tRNA gene sequence 
GGGTCTGTAGCTCAATTAGGCAGAGTATTGGTCTCCAAAACCAAAGGTTCCAGGTTCGAT
TCCTGGCAGACCCGCAA
Downstream region at tRNA end position 
attgattgcg
Secondary structure (Cloverleaf model)
>SRA1044716	Trp	CCA
                   g      GCAA attgattgcg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T T
                    T     G G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C A G G     C
    A       | | | +                 T T
    G       G A G T
      G C A        A     AGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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