The detailed information of tRNA gene sequence


Sequence ID>SRA1044858
Genome IDSRR035092.359607
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 341
End posion on genome 416
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttgtatgt
tRNA gene sequence 
AGGCTCATAGTGTCAATGGCTAGCACGTTGGTCTCCAAAACCAAAAGTCCGGGTTCGAGT
CCTGGTGGGCCTGCCA
Downstream region at tRNA end position 
gattaannnn
Secondary structure (Cloverleaf model)
>SRA1044858	Trp	CCA
                   t      GCCA gattaannnn
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T G
                    T     G G T C C     A
      A A C        A      | | + | |     G
    T       T G T G       C C G G G     C
    G       + | | |                 T T
    G       G C A C
      C T A        G     AAGT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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