The detailed information of tRNA gene sequence


Sequence ID>SRA1044923
Genome IDSRR035092.373468
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 119
End posion on genome 30
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttctcgttta
tRNA gene sequence 
GGAGGAGTGGCTGAGTGGTTGAAGGCGCCCGATTCGAAATCGGGTGAGGGAGCAATCCCT
CCGTGAGTTCGAATCTCACCTCCTCCGCCT
Downstream region at tRNA end position 
tcgctcgccg
Secondary structure (Cloverleaf model)
>SRA1044923	Ser	CGA
                   a      GCCT tcgctcgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TGAGGGAGCAATCCCTCC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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