The detailed information of tRNA gene sequence


Sequence ID>SRA1045004
Genome IDSRR035092.390769
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 283
End posion on genome 213
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctccatttgt
tRNA gene sequence 
GCATCTATGTCCGATTGGCAAGGTGTCCGGTTGCAACCCGGAATATGTAGGTTCAATTCC
TACTGGATGCTgag
Downstream region at tRNA end position 
tcgccgtctc
Secondary structure (Cloverleaf model)
>SRA1045004	Cys	GCA
                   t      Tgag tcgccgtctc
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     A - T          T T
                    T     C A T C C     A
        T A        G      | | | | |     A
      T     G C C T       G T A G G     C
      G       | |                   T T
      G     A G G T
        C A        G     ATAT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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