The detailed information of tRNA gene sequence


Sequence ID>SRA1045092
Genome IDSRR035092.409532
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 201
End posion on genome 289
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataaatact
tRNA gene sequence 
GGAGAGTTGCCAGAGTGGTCGAATGGGACTGACTGCTAATCAGTTGTACCTTAACTGTGT
ACCGAGGGTTCGAATCCCTTGCTCTCCGCtt
Downstream region at tRNA end position 
gacttatttt
Secondary structure (Cloverleaf model)
>SRA1045092	Ser	GCT
                   t      GCtt gacttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTACCTTAACTGTGTACC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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