The detailed information of tRNA gene sequence


Sequence ID>SRA1045117
Genome IDSRR035092.414416
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 178
End posion on genome 96
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatattataT
tRNA gene sequence 
GCCTCGATCGCATAGTGGTATTGCATCGGATTGCTAATCCGAGTCCTTCGGGACTGGTAG
GTTCGATTCCTGCTCGAGGCGTtt
Downstream region at tRNA end position 
ttgaatctca
Secondary structure (Cloverleaf model)
>SRA1045117	Ser	GCT
                   T      GTtt ttgaatctca
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     C G T C C     A
        G A        C      | + | | |     G
      T     T A C G       G T A G G     C
      G       | | |                 T T
      G     T T G C
        T A        A     GTCCTTCGGGACTG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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