The detailed information of tRNA gene sequence


Sequence ID>SRA1045122
Genome IDSRR035092.415681
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 175
End posion on genome 86
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnaatgtttt
tRNA gene sequence 
GGTGAGGTGTCAGAGCCAGGTTGATTGAGACGGTTTGCTAAATCGTTGTGTGTAACAGCA
CCGCAGGTTCAAATCCTGTCCTCACCGCCA
Downstream region at tRNA end position 
gaatattccc
Secondary structure (Cloverleaf model)
>SRA1045122	Ser	GCT
                   t      GCCA gaatattccc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C C G A        G      + | | | |     A
  A         G A C T       G C A G G     C
  G         + | | |                 T T
  G         T T G A
    T T G A        G     TGTGTGTAACAGCACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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