The detailed information of tRNA gene sequence


Sequence ID>W2011483638
Genome IDRQYL01000003
Search identical group
Phylum/ClassSynergistota
SpeciesFretibacterium sp. OH1220_COT-178 [RQYL]
Start position on genome 148620
End posion on genome 148523
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atgcagctct
tRNA gene sequence 
GGAGGTGAGATTCGTCTGGTGACGGGCCCGGGCTTCAAACCCGGTGAGAGGCGGTTTGCG
CCGTCTCTGGTGGGTTCGATCCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
agggacgcaa
Secondary structure (Cloverleaf model)
>W2011483638	SeC	TCA
                   t      GCCA agggacgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     A   A          C T
                    G     C A C C C     A
      T C T        A      | | | | |     G
    G       G C T T       G T G G G     C
    G       | | + +                 T T
    T       C G G G
      G A          C     TGAGAGGCGGTTTGCGCCGTCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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