The detailed information of tRNA gene sequence


Sequence ID>SRA1045545
Genome IDSRR035093.118623
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 161
End posion on genome 88
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgatttaat
tRNA gene sequence 
GCGCTTGTAGCTCAATGGTCAGAGCAGTCGGCTCATAACTGATTGGTTACTGGTTCGAAT
CCAGTCAGGCGCACtt
Downstream region at tRNA end position 
tttattatgg
Secondary structure (Cloverleaf model)
>SRA1045545	Met	CAT
                   t      ACtt tttattatgg
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     T G A C C     A
      T A A        A      | | | | |     G
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    T - A
                    C - G
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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