The detailed information of tRNA gene sequence


Sequence ID>SRA1045553
Genome IDSRR035093.120880
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 171
End posion on genome 260
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgcctaatc
tRNA gene sequence 
GGAGAGATGTGAGAGCGGTTTAATCAGCACGCTTGGAAAGTGTGTAAACAGGCAACTGTT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttagaaaa
Secondary structure (Cloverleaf model)
>SRA1045553	Ser	GGA
                   c      GCCA ttttagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G T       G A G G G     C
    G         | | |                 T T
    T       A T C A
      T T A        G     TAAACAGGCAACTGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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