The detailed information of tRNA gene sequence


Sequence ID>W2011495794
Genome IDRXFR01000007
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax sp. 553 [RXFR]
Start position on genome 445439
End posion on genome 445515
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctaagtctgc
tRNA gene sequence 
CGCGCGATGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCTCGCGCAACCA
Downstream region at tRNA end position 
attaaaaagg
Secondary structure (Cloverleaf model)
>W2011495794	fMet	CAT
                   c      ACCA attaaaaagg
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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