The detailed information of tRNA gene sequence


Sequence ID>SRA1045662
Genome IDSRR035093.143044
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 198
End posion on genome 123
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcccaaaaaT
tRNA gene sequence 
AGCACTGTAGGGAAATTTGGTATCCCATCAGCCTCATGCGTTGAAGATTAATGGTTCGAA
TCCATTCGGTGCTATaa
Downstream region at tRNA end position 
ttcttttaag
Secondary structure (Cloverleaf model)
>SRA1045662	Met	CAT
                   T      ATaa ttcttttaag
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     T T A C C     A
      T A A        A      | | | | |     G
    T       A G G G       A A T G G     C
    T       | | | |                 T T
    G       T C C C
      G T A        A     AGATT
                    T - A
                    C - G
                    A - T
                    G + T
                    C - G
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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