The detailed information of tRNA gene sequence


Sequence ID>W2011509595
Genome IDRYZH01000002
Search identical group
Phylum/ClassPlanctomycetota
SpeciesIsosphaeraceae bacterium GM2012 [RYZH]
Start position on genome 19370
End posion on genome 19470
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gagtccccgg
tRNA gene sequence 
GGGAGCGGGCGCACGGCTGGTGCCGGCCCTGGTCTTCAAAACCAGTCGGGCGGCCTGGAG
ACAGGTCGCCGGTGGGTTCGATTCCCATACGCTCCCGTCC
Downstream region at tRNA end position 
Agtcgaccgg
Secondary structure (Cloverleaf model)
>W2011509595	SeC	TCA
                   g      GTCC Agtcgaccgg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          C T
                    G     A T A C C     T
    C G G C        G      | +   |       A
  T         A C G C       T G G G T     G
  G           |                     T C
  G         C G G C
    T G C          C     TCGGGCGGCCTGGAGACAGGTCGCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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