The detailed information of tRNA gene sequence


Sequence ID>W2011530501
Genome IDSBHO01000011
Search identical group
Phylum/ClassHydrogenophilia
SpeciesTepidiphilus sp. J18 [SBHO]
Start position on genome 49482
End posion on genome 49406
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctttatcgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
tcgccaaaaa
Secondary structure (Cloverleaf model)
>W2011530501	fMet	CAT
                   t      ACCA tcgccaaaaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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