The detailed information of tRNA gene sequence


Sequence ID>W2011536731
Genome IDSCKP01000016
Search identical group
Phylum/ClassFidelibacterota
SpeciesCandidatus Marinimicrobia bacterium D37C17 [SCKP]
Start position on genome 33982
End posion on genome 34076
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataaaatatt
tRNA gene sequence 
GGAAGTGAATGTGACCCTGGTGGGCACCACAGCCTTCAAAGCTGATGTCTCGGGTTAAAC
TGAGAGATGGGTTCGATTCCCATACGCTTCCGCCA
Downstream region at tRNA end position 
attaagagga
Secondary structure (Cloverleaf model)
>W2011536731	SeC	TCA
                   t      GCCA attaagagga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C
                     A   A          T T
                    A     T A C C C     A
      C C C        T      | | | | |     G
    T       A G T G       A T G G G     C
    G         | | |                 T T
    G       G C A C
      T G G        C     TGTCTCGGGTTAAACTGAGAG
                    A   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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