The detailed information of tRNA gene sequence


Sequence ID>SRA1046213
Genome IDSRR035093.254577
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 423
End posion on genome 349
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
TGCGAAGTAGCTCAGCTAGGTAGAGCATCGGGCTCATATTCCGACGGTCGGCAGTTCAAA
TCTGCCCTTCGCACCtt
Downstream region at tRNA end position 
tttaattctt
Secondary structure (Cloverleaf model)
>SRA1046213	Met	CAT
                   a      CCtt tttaattctt
                     T - A
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C G T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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