The detailed information of tRNA gene sequence


Sequence ID>SRA1046288
Genome IDSRR035093.271477
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 172
End posion on genome 96
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagacaacaa
tRNA gene sequence 
GGGCCTGTAGTTCAGTTGGTTAGAACGCGGTGCTCATAACGCCGTTGTCGCAGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
aatattgtta
Secondary structure (Cloverleaf model)
>SRA1046288	Met	CAT
                   a      ACCA aatattgtta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     TTGTC
                    C - G
                    G - C
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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