The detailed information of tRNA gene sequence


Sequence ID>SRA1046398
Genome IDSRR035093.298789
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 447
End posion on genome 522
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatgaatat
tRNA gene sequence 
AGCGATATGGTGAAATTGGTTATCACATGCTCCTCATAAGGGTAAATTCCGAGTTCGAGT
CTCGGTATCGCTACAA
Downstream region at tRNA end position 
aaagggnnnn
Secondary structure (Cloverleaf model)
>SRA1046398	Met	CAT
                   t      ACAA aaagggnnnn
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     G G C T C     A
      T A A        G      | | | | |     G
    T       A G T G       C C G A G     C
    G       | | | |                 T T
    G       T C A C
      T T A        A     AATT
                    T - A
                    G + T
                    C - G
                    T + G
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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