The detailed information of tRNA gene sequence


Sequence ID>W2011579593
Genome IDSHKL01000001
Search identical group
Phylum/ClassActinomycetota
SpeciesPseudonocardia sediminis DSM 45779 [SHKL]
Start position on genome 4999652
End posion on genome 4999728
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cttggcccga
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCACTCGCTTTGGGAGCGAGGGGCCGTGGGTTCAAA
TCCCGCCACCCCGACCA
Downstream region at tRNA end position 
cacatgccca
Secondary structure (Cloverleaf model)
>W2011579593	Pro	TGG
                   a      ACCA cacatgccca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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