The detailed information of tRNA gene sequence


Sequence ID>W2011580783
Genome IDSHLI01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalopeptonella vilamensis DSM 21056 [SHLI]
Start position on genome 456073
End posion on genome 456163
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catgcttatt
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCGAAGGAGCGCGCCTGGAAAGCGCGTGTACGGTAACCCCGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gacataaaag
Secondary structure (Cloverleaf model)
>W2011580783	Ser	GGA
                   t      GCCA gacataaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGTACGGTAACCCCGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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