The detailed information of tRNA gene sequence


Sequence ID>SRA1046687
Genome IDSRR035093.360894
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 188
End posion on genome 277
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgtcgcatt
tRNA gene sequence 
GGAGATGTGGCTGAGTGGTTGAAGGCGCTACGTTGGAAACGTAGTGAGCTCGAAAGGGTT
CCGCAGGTTCGAATCCTGTCATCTCCGCCA
Downstream region at tRNA end position 
acatgcatta
Secondary structure (Cloverleaf model)
>SRA1046687	Ser	GGA
                   t      GCCA acatgcatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TGAGCTCGAAAGGGTTCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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