The detailed information of tRNA gene sequence


Sequence ID>SRA1046808
Genome IDSRR035093.390213
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 308
End posion on genome 399
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaatacat
tRNA gene sequence 
AGAAGTGTACTCAAATTTGGTAAAGAGGGCAGTTTGCTAAACTGTTAGGCCGGTTAATAA
CTGGTGCGGGGTTCGAACCCCTCCATTTCTGCtt
Downstream region at tRNA end position 
atttttaaat
Secondary structure (Cloverleaf model)
>SRA1046808	Ser	GCT
                   t      GCtt atttttaaat
                     A - T
                     G - C
                     A - T
                     A - T
                     G + T
                     T - A
                     G - C          C A
                    T     C T C C C     A
    T T A A        A        + | | |     G
  T         A C T C       C G G G G     C
  G           | | |                 T T
  G         A G A G
    T A A          G     TAGGCCGGTTAATAACTGGTG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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