The detailed information of tRNA gene sequence


Sequence ID>W2011610297
Genome IDSJPJ01000001
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium CA13 [SJPJ]
Start position on genome 2409359
End posion on genome 2409288
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cccctatctt
tRNA gene sequence 
AACGCTGGAGCCAGATGGCTAGGCGGCCGGCTGCAACCCGGTTCAAGTGGGTTCGACTCC
CACCAGCGTTTCtt
Downstream region at tRNA end position 
gatcgaccaa
Secondary structure (Cloverleaf model)
>W2011610297	Cys	GCA
                   t      TCtt gatcgaccaa
                     A - T
                     A - T
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    G     C A C C C     A
        A G        A      | | | | |     G
      T     A C C G       G T G G G     C
      G       | | |                 T T
      G     A G G C
        C T        G     TCAA
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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