The detailed information of tRNA gene sequence


Sequence ID>W2011610605
Genome IDSJPP01000001
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium CA54 [SJPP]
Start position on genome 2638073
End posion on genome 2638147
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gacacaatga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGCAGGTTCGAA
TCCTGTCCCCGCCACtt
Downstream region at tRNA end position 
aaaccccgga
Secondary structure (Cloverleaf model)
>W2011610605	fMet	CAT
                   a      ACtt aaaccccgga
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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